Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
P06320 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 AA386476-201ENSMUST00000098781 1665 ntBASIC11.79□□□□□ -0.52
P06320 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC11.79□□□□□ -0.52
P06320 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC11.79□□□□□ -0.52
P06320 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC11.79□□□□□ -0.52
P06320 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
P06320 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
P06320 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
P06320 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P06320 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.78□□□□□ -0.52
P06320 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
P06320 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC11.78□□□□□ -0.52
P06320 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P06320 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
P06320 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06320 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P06320 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P06320 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P06320 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P06320 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
P06320 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
P06320 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06320 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P06320 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P06320 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06320 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC11.77□□□□□ -0.53
P06320 Gm43530-201ENSMUST00000195920 274 ntBASIC11.77□□□□□ -0.53
P06320 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P06320 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
P06320 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06320 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P06320 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
P06320 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
P06320 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P06320 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
P06320 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06320 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P06320 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC11.77□□□□□ -0.53
P06320 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC11.76□□□□□ -0.53
P06320 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
P06320 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC11.76□□□□□ -0.53
P06320 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
P06320 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
P06320 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P06320 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms