Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.52■□□□□ 0.24
NgfP01139 Mir1199-201ENSMUST00000117015 119 ntBASIC16.52■□□□□ 0.24
NgfP01139 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NgfP01139 Gm22325-201ENSMUST00000158904 308 ntBASIC16.52■□□□□ 0.24
NgfP01139 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NgfP01139 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.52■□□□□ 0.24
NgfP01139 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NgfP01139 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NgfP01139 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NgfP01139 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NgfP01139 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
NgfP01139 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NgfP01139 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NgfP01139 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NgfP01139 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NgfP01139 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NgfP01139 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NgfP01139 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.5■□□□□ 0.23
NgfP01139 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.5■□□□□ 0.23
NgfP01139 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NgfP01139 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NgfP01139 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NgfP01139 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NgfP01139 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NgfP01139 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.5■□□□□ 0.23
NgfP01139 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NgfP01139 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NgfP01139 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NgfP01139 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.49■□□□□ 0.23
NgfP01139 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NgfP01139 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.49■□□□□ 0.23
NgfP01139 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.49■□□□□ 0.23
NgfP01139 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.49■□□□□ 0.23
NgfP01139 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NgfP01139 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NgfP01139 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NgfP01139 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.49■□□□□ 0.23
NgfP01139 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.48■□□□□ 0.23
NgfP01139 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NgfP01139 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NgfP01139 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.48■□□□□ 0.23
NgfP01139 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NgfP01139 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NgfP01139 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.48■□□□□ 0.23
NgfP01139 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NgfP01139 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
NgfP01139 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NgfP01139 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NgfP01139 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NgfP01139 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.48■□□□□ 0.23
NgfP01139 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NgfP01139 Golph3-202ENSMUST00000226517 2359 ntBASIC16.48■□□□□ 0.23
NgfP01139 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NgfP01139 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.47■□□□□ 0.23
NgfP01139 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.47■□□□□ 0.23
NgfP01139 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.47■□□□□ 0.23
NgfP01139 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
NgfP01139 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.47■□□□□ 0.23
NgfP01139 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NgfP01139 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NgfP01139 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NgfP01139 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NgfP01139 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.46■□□□□ 0.23
NgfP01139 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.46■□□□□ 0.23
NgfP01139 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Zfp783-201ENSMUST00000095946 670 ntBASIC16.46■□□□□ 0.23
NgfP01139 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NgfP01139 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NgfP01139 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NgfP01139 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NgfP01139 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NgfP01139 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NgfP01139 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NgfP01139 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NgfP01139 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms