Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hcn1O88704 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hcn1O88704 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.75■□□□□ 0.43
Hcn1O88704 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hcn1O88704 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hcn1O88704 Gm42778-201ENSMUST00000199644 553 ntBASIC17.75■□□□□ 0.43
Hcn1O88704 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Hcn1O88704 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hcn1O88704 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.74■□□□□ 0.43
Hcn1O88704 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.74■□□□□ 0.43
Hcn1O88704 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.74■□□□□ 0.43
Hcn1O88704 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.74■□□□□ 0.43
Hcn1O88704 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hcn1O88704 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hcn1O88704 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hcn1O88704 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
Hcn1O88704 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hcn1O88704 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.73■□□□□ 0.43
Hcn1O88704 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hcn1O88704 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hcn1O88704 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hcn1O88704 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hcn1O88704 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.73■□□□□ 0.43
Hcn1O88704 Gm26571-201ENSMUST00000181399 666 ntBASIC17.73■□□□□ 0.43
Hcn1O88704 Gm10033-202ENSMUST00000211874 928 ntBASIC17.73■□□□□ 0.43
Hcn1O88704 Gm18671-201ENSMUST00000214826 683 ntBASIC17.73■□□□□ 0.43
Hcn1O88704 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hcn1O88704 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hcn1O88704 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Reep4-203ENSMUST00000226563 1444 ntBASIC17.72■□□□□ 0.43
Hcn1O88704 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Hcn1O88704 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hcn1O88704 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.72■□□□□ 0.43
Hcn1O88704 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hcn1O88704 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcn1O88704 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn1O88704 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hcn1O88704 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hcn1O88704 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn1O88704 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
Hcn1O88704 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn1O88704 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.71■□□□□ 0.43
Hcn1O88704 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn1O88704 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn1O88704 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.71■□□□□ 0.43
Hcn1O88704 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.71■□□□□ 0.43
Hcn1O88704 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn1O88704 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hcn1O88704 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn1O88704 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn1O88704 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hcn1O88704 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hcn1O88704 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.71■□□□□ 0.43
Hcn1O88704 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.7■□□□□ 0.42
Hcn1O88704 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn1O88704 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn1O88704 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn1O88704 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn1O88704 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn1O88704 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn1O88704 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.7■□□□□ 0.42
Hcn1O88704 Gm10849-201ENSMUST00000100397 618 ntBASIC17.7■□□□□ 0.42
Hcn1O88704 Gm13234-201ENSMUST00000120010 747 ntBASIC17.7■□□□□ 0.42
Hcn1O88704 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn1O88704 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.7■□□□□ 0.42
Hcn1O88704 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hcn1O88704 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn1O88704 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcn1O88704 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.69■□□□□ 0.42
Hcn1O88704 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hcn1O88704 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn1O88704 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn1O88704 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn1O88704 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcn1O88704 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms