Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Dio3-201ENSMUST00000097228 1449 ntBASIC15.9■□□□□ 0.14
Cldn1O88551 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldn1O88551 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.9■□□□□ 0.14
Cldn1O88551 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldn1O88551 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Cldn1O88551 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
Cldn1O88551 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Cldn1O88551 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.89■□□□□ 0.13
Cldn1O88551 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldn1O88551 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldn1O88551 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cldn1O88551 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.88■□□□□ 0.13
Cldn1O88551 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldn1O88551 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cldn1O88551 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.88■□□□□ 0.13
Cldn1O88551 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cldn1O88551 Gm10698-201ENSMUST00000182663 604 ntBASIC15.88■□□□□ 0.13
Cldn1O88551 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.88■□□□□ 0.13
Cldn1O88551 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cldn1O88551 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Cldn1O88551 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldn1O88551 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldn1O88551 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldn1O88551 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldn1O88551 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldn1O88551 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cldn1O88551 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cldn1O88551 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cldn1O88551 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.87■□□□□ 0.13
Cldn1O88551 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Cldn1O88551 Gm11643-201ENSMUST00000119578 864 ntBASIC15.87■□□□□ 0.13
Cldn1O88551 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.87■□□□□ 0.13
Cldn1O88551 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.87■□□□□ 0.13
Cldn1O88551 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Cldn1O88551 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cldn1O88551 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cldn1O88551 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldn1O88551 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldn1O88551 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.86■□□□□ 0.13
Cldn1O88551 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldn1O88551 Gm9987-201ENSMUST00000069768 567 ntBASIC15.86■□□□□ 0.13
Cldn1O88551 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldn1O88551 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldn1O88551 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cldn1O88551 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cldn1O88551 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cldn1O88551 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cldn1O88551 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cldn1O88551 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cldn1O88551 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cldn1O88551 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldn1O88551 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldn1O88551 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.85■□□□□ 0.13
Cldn1O88551 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.85■□□□□ 0.13
Cldn1O88551 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldn1O88551 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.85■□□□□ 0.13
Cldn1O88551 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.85■□□□□ 0.13
Cldn1O88551 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Cldn1O88551 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.85■□□□□ 0.13
Cldn1O88551 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldn1O88551 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldn1O88551 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldn1O88551 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cldn1O88551 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldn1O88551 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldn1O88551 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldn1O88551 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldn1O88551 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cldn1O88551 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.84■□□□□ 0.13
Cldn1O88551 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn1O88551 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn1O88551 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn1O88551 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn1O88551 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn1O88551 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms