Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shoc2O88520 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shoc2O88520 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shoc2O88520 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.21■□□□□ 0.67
Shoc2O88520 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shoc2O88520 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.21■□□□□ 0.67
Shoc2O88520 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shoc2O88520 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shoc2O88520 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shoc2O88520 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shoc2O88520 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Shoc2O88520 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shoc2O88520 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shoc2O88520 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shoc2O88520 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shoc2O88520 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.2■□□□□ 0.66
Shoc2O88520 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shoc2O88520 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shoc2O88520 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shoc2O88520 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Shoc2O88520 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shoc2O88520 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Shoc2O88520 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.2■□□□□ 0.66
Shoc2O88520 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shoc2O88520 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shoc2O88520 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.19■□□□□ 0.66
Shoc2O88520 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Shoc2O88520 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Shoc2O88520 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.19■□□□□ 0.66
Shoc2O88520 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.19■□□□□ 0.66
Shoc2O88520 Gm18671-201ENSMUST00000214826 683 ntBASIC19.19■□□□□ 0.66
Shoc2O88520 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shoc2O88520 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shoc2O88520 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shoc2O88520 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.19■□□□□ 0.66
Shoc2O88520 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.19■□□□□ 0.66
Shoc2O88520 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shoc2O88520 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shoc2O88520 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shoc2O88520 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Shoc2O88520 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shoc2O88520 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shoc2O88520 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shoc2O88520 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shoc2O88520 Gm26571-201ENSMUST00000181399 666 ntBASIC19.18■□□□□ 0.66
Shoc2O88520 Gm10033-202ENSMUST00000211874 928 ntBASIC19.18■□□□□ 0.66
Shoc2O88520 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shoc2O88520 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.18■□□□□ 0.66
Shoc2O88520 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.18■□□□□ 0.66
Shoc2O88520 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shoc2O88520 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shoc2O88520 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shoc2O88520 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shoc2O88520 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Shoc2O88520 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shoc2O88520 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.17■□□□□ 0.66
Shoc2O88520 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.17■□□□□ 0.66
Shoc2O88520 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.17■□□□□ 0.66
Shoc2O88520 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shoc2O88520 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shoc2O88520 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
Shoc2O88520 Grk6-206ENSMUST00000224995 2971 ntBASIC19.17■□□□□ 0.66
Shoc2O88520 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shoc2O88520 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shoc2O88520 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.17■□□□□ 0.66
Shoc2O88520 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shoc2O88520 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shoc2O88520 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shoc2O88520 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shoc2O88520 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shoc2O88520 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shoc2O88520 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shoc2O88520 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shoc2O88520 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.16■□□□□ 0.66
Shoc2O88520 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shoc2O88520 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.16■□□□□ 0.66
Shoc2O88520 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.16■□□□□ 0.66
Shoc2O88520 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shoc2O88520 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shoc2O88520 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.16■□□□□ 0.66
Shoc2O88520 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Shoc2O88520 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shoc2O88520 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shoc2O88520 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shoc2O88520 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.15■□□□□ 0.66
Shoc2O88520 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shoc2O88520 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shoc2O88520 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shoc2O88520 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shoc2O88520 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shoc2O88520 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shoc2O88520 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.14■□□□□ 0.66
Shoc2O88520 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shoc2O88520 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shoc2O88520 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shoc2O88520 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shoc2O88520 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.14■□□□□ 0.65
Shoc2O88520 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shoc2O88520 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shoc2O88520 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms