Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1hO88427 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1hO88427 Gm37292-201ENSMUST00000192062 758 ntBASIC18.21■□□□□ 0.51
Cacna1hO88427 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.21■□□□□ 0.51
Cacna1hO88427 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1hO88427 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1hO88427 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Cacna1hO88427 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.2■□□□□ 0.5
Cacna1hO88427 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1hO88427 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1hO88427 Gm10138-203ENSMUST00000206952 366 ntBASIC18.2■□□□□ 0.5
Cacna1hO88427 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1hO88427 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1hO88427 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1hO88427 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1hO88427 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1hO88427 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1hO88427 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1hO88427 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1hO88427 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1hO88427 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cacna1hO88427 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1hO88427 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1hO88427 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1hO88427 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1hO88427 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1hO88427 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.19■□□□□ 0.5
Cacna1hO88427 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.19■□□□□ 0.5
Cacna1hO88427 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1hO88427 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.18■□□□□ 0.5
Cacna1hO88427 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.18■□□□□ 0.5
Cacna1hO88427 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Cacna1hO88427 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1hO88427 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1hO88427 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1hO88427 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cacna1hO88427 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1hO88427 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.18■□□□□ 0.5
Cacna1hO88427 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1hO88427 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1hO88427 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1hO88427 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1hO88427 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.17■□□□□ 0.5
Cacna1hO88427 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cacna1hO88427 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cacna1hO88427 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cacna1hO88427 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1hO88427 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1hO88427 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1hO88427 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cacna1hO88427 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1hO88427 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1hO88427 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cacna1hO88427 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.16■□□□□ 0.5
Cacna1hO88427 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1hO88427 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.16■□□□□ 0.5
Cacna1hO88427 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cacna1hO88427 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1hO88427 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1hO88427 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1hO88427 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1hO88427 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.16■□□□□ 0.5
Cacna1hO88427 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1hO88427 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1hO88427 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1hO88427 Gm18958-201ENSMUST00000174258 762 ntBASIC18.15■□□□□ 0.5
Cacna1hO88427 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1hO88427 Gm27463-201ENSMUST00000183569 57 ntBASIC18.15■□□□□ 0.5
Cacna1hO88427 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1hO88427 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cacna1hO88427 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1hO88427 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cacna1hO88427 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1hO88427 Gm2274-201ENSMUST00000184539 609 ntBASIC18.15■□□□□ 0.5
Cacna1hO88427 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.15■□□□□ 0.5
Cacna1hO88427 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cacna1hO88427 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cacna1hO88427 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.14■□□□□ 0.49
Cacna1hO88427 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1hO88427 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1hO88427 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Cacna1hO88427 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1hO88427 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.14■□□□□ 0.49
Cacna1hO88427 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.14■□□□□ 0.49
Cacna1hO88427 Gm18115-201ENSMUST00000221209 621 ntBASIC18.14■□□□□ 0.49
Cacna1hO88427 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1hO88427 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1hO88427 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1hO88427 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms