Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh16O88338 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh16O88338 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh16O88338 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh16O88338 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh16O88338 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh16O88338 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh16O88338 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh16O88338 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cdh16O88338 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cdh16O88338 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Cdh16O88338 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh16O88338 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.2■□□□□ 0.5
Cdh16O88338 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.2■□□□□ 0.5
Cdh16O88338 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh16O88338 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh16O88338 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh16O88338 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh16O88338 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cdh16O88338 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh16O88338 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.2■□□□□ 0.5
Cdh16O88338 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cdh16O88338 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh16O88338 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.2■□□□□ 0.5
Cdh16O88338 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Cdh16O88338 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh16O88338 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh16O88338 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh16O88338 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh16O88338 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.2■□□□□ 0.5
Cdh16O88338 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.19■□□□□ 0.5
Cdh16O88338 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh16O88338 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh16O88338 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh16O88338 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh16O88338 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
Cdh16O88338 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh16O88338 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh16O88338 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh16O88338 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh16O88338 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh16O88338 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.19■□□□□ 0.5
Cdh16O88338 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh16O88338 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdh16O88338 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Cdh16O88338 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh16O88338 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cdh16O88338 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh16O88338 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh16O88338 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh16O88338 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.17■□□□□ 0.5
Cdh16O88338 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh16O88338 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh16O88338 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh16O88338 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh16O88338 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh16O88338 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh16O88338 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cdh16O88338 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.16■□□□□ 0.5
Cdh16O88338 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cdh16O88338 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cdh16O88338 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.16■□□□□ 0.5
Cdh16O88338 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cdh16O88338 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.16■□□□□ 0.5
Cdh16O88338 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cdh16O88338 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh16O88338 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdh16O88338 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh16O88338 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdh16O88338 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms