Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a1O88207 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.97■□□□□ 0.31
Col5a1O88207 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.97■□□□□ 0.31
Col5a1O88207 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a1O88207 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
Col5a1O88207 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Col5a1O88207 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a1O88207 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col5a1O88207 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a1O88207 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a1O88207 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col5a1O88207 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a1O88207 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a1O88207 Golph3-202ENSMUST00000226517 2359 ntBASIC16.96■□□□□ 0.3
Col5a1O88207 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Col5a1O88207 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Col5a1O88207 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.96■□□□□ 0.3
Col5a1O88207 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Col5a1O88207 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Col5a1O88207 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col5a1O88207 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a1O88207 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a1O88207 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a1O88207 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a1O88207 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a1O88207 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a1O88207 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a1O88207 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a1O88207 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col5a1O88207 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a1O88207 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a1O88207 Gm13158-201ENSMUST00000122007 736 ntBASIC16.94■□□□□ 0.3
Col5a1O88207 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a1O88207 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a1O88207 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.94■□□□□ 0.3
Col5a1O88207 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a1O88207 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.94■□□□□ 0.3
Col5a1O88207 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a1O88207 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.94■□□□□ 0.3
Col5a1O88207 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col5a1O88207 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.93■□□□□ 0.3
Col5a1O88207 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a1O88207 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Col5a1O88207 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a1O88207 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a1O88207 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Col5a1O88207 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Col5a1O88207 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a1O88207 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a1O88207 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a1O88207 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a1O88207 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a1O88207 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a1O88207 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a1O88207 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.92■□□□□ 0.3
Col5a1O88207 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.92■□□□□ 0.3
Col5a1O88207 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a1O88207 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a1O88207 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a1O88207 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col5a1O88207 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.91■□□□□ 0.3
Col5a1O88207 Gm6659-201ENSMUST00000174752 547 ntBASIC16.91■□□□□ 0.3
Col5a1O88207 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.91■□□□□ 0.3
Col5a1O88207 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a1O88207 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.91■□□□□ 0.3
Col5a1O88207 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a1O88207 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a1O88207 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a1O88207 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a1O88207 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a1O88207 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a1O88207 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Col5a1O88207 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col5a1O88207 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a1O88207 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a1O88207 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a1O88207 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a1O88207 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.9■□□□□ 0.3
Col5a1O88207 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a1O88207 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a1O88207 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col5a1O88207 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.89■□□□□ 0.29
Col5a1O88207 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col5a1O88207 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col5a1O88207 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a1O88207 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a1O88207 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a1O88207 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col5a1O88207 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms