Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Pdlim3O70209 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdlim3O70209 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pdlim3O70209 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim3O70209 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim3O70209 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim3O70209 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim3O70209 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim3O70209 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.85■□□□□ 0.29
Pdlim3O70209 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim3O70209 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.85■□□□□ 0.29
Pdlim3O70209 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim3O70209 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim3O70209 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim3O70209 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdlim3O70209 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.85■□□□□ 0.29
Pdlim3O70209 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pdlim3O70209 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim3O70209 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim3O70209 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.84■□□□□ 0.29
Pdlim3O70209 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim3O70209 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pdlim3O70209 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim3O70209 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pdlim3O70209 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim3O70209 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdlim3O70209 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Pdlim3O70209 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Pdlim3O70209 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pdlim3O70209 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.83■□□□□ 0.28
Pdlim3O70209 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.83■□□□□ 0.28
Pdlim3O70209 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pdlim3O70209 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pdlim3O70209 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 Gm7860-201ENSMUST00000121190 879 ntBASIC16.82■□□□□ 0.28
Pdlim3O70209 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.82■□□□□ 0.28
Pdlim3O70209 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.82■□□□□ 0.28
Pdlim3O70209 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pdlim3O70209 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdlim3O70209 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pdlim3O70209 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pdlim3O70209 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Pdlim3O70209 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pdlim3O70209 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdlim3O70209 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Pdlim3O70209 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim3O70209 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim3O70209 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pdlim3O70209 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim3O70209 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim3O70209 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim3O70209 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pdlim3O70209 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.8■□□□□ 0.28
Pdlim3O70209 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.8■□□□□ 0.28
Pdlim3O70209 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms