Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna4O70174 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chrna4O70174 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna4O70174 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna4O70174 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.81■□□□□ 0.6
Chrna4O70174 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna4O70174 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chrna4O70174 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna4O70174 AV356131-201ENSMUST00000206201 750 ntBASIC18.81■□□□□ 0.6
Chrna4O70174 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna4O70174 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chrna4O70174 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna4O70174 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna4O70174 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna4O70174 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chrna4O70174 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Chrna4O70174 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna4O70174 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna4O70174 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chrna4O70174 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chrna4O70174 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Chrna4O70174 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna4O70174 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna4O70174 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna4O70174 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.8■□□□□ 0.6
Chrna4O70174 Gm8495-201ENSMUST00000188740 694 ntBASIC18.8■□□□□ 0.6
Chrna4O70174 Gm6420-201ENSMUST00000193885 723 ntBASIC18.8■□□□□ 0.6
Chrna4O70174 Gm7514-201ENSMUST00000209475 934 ntBASIC18.8■□□□□ 0.6
Chrna4O70174 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Chrna4O70174 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Chrna4O70174 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.8■□□□□ 0.6
Chrna4O70174 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna4O70174 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Chrna4O70174 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna4O70174 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna4O70174 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna4O70174 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna4O70174 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna4O70174 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna4O70174 Nespas-201ENSMUST00000143738 1083 ntBASIC18.79■□□□□ 0.6
Chrna4O70174 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.79■□□□□ 0.6
Chrna4O70174 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.79■□□□□ 0.6
Chrna4O70174 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna4O70174 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna4O70174 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna4O70174 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna4O70174 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna4O70174 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna4O70174 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.79■□□□□ 0.6
Chrna4O70174 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna4O70174 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Chrna4O70174 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna4O70174 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna4O70174 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna4O70174 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna4O70174 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna4O70174 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna4O70174 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna4O70174 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna4O70174 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna4O70174 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna4O70174 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna4O70174 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna4O70174 Gm10849-201ENSMUST00000100397 618 ntBASIC18.77■□□□□ 0.6
Chrna4O70174 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna4O70174 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna4O70174 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna4O70174 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.76■□□□□ 0.59
Chrna4O70174 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna4O70174 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna4O70174 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.76■□□□□ 0.59
Chrna4O70174 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna4O70174 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna4O70174 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna4O70174 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.76■□□□□ 0.59
Chrna4O70174 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.76■□□□□ 0.59
Chrna4O70174 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna4O70174 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Chrna4O70174 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna4O70174 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna4O70174 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna4O70174 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna4O70174 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Chrna4O70174 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Chrna4O70174 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna4O70174 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna4O70174 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna4O70174 Gm42569-201ENSMUST00000200539 472 ntBASIC18.75■□□□□ 0.59
Chrna4O70174 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna4O70174 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna4O70174 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna4O70174 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna4O70174 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna4O70174 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna4O70174 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.74■□□□□ 0.59
Chrna4O70174 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna4O70174 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Chrna4O70174 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Chrna4O70174 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna4O70174 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms