Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trdmt1O55055 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.61■□□□□ 0.89
Trdmt1O55055 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.6■□□□□ 0.89
Trdmt1O55055 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trdmt1O55055 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trdmt1O55055 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.6■□□□□ 0.89
Trdmt1O55055 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trdmt1O55055 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Trdmt1O55055 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trdmt1O55055 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trdmt1O55055 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trdmt1O55055 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trdmt1O55055 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trdmt1O55055 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trdmt1O55055 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trdmt1O55055 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trdmt1O55055 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.59■□□□□ 0.89
Trdmt1O55055 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trdmt1O55055 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.59■□□□□ 0.89
Trdmt1O55055 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trdmt1O55055 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.59■□□□□ 0.89
Trdmt1O55055 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trdmt1O55055 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.59■□□□□ 0.89
Trdmt1O55055 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.59■□□□□ 0.89
Trdmt1O55055 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trdmt1O55055 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Trdmt1O55055 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trdmt1O55055 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Trdmt1O55055 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trdmt1O55055 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Trdmt1O55055 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trdmt1O55055 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trdmt1O55055 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdmt1O55055 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdmt1O55055 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.57■□□□□ 0.88
Trdmt1O55055 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.57■□□□□ 0.88
Trdmt1O55055 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdmt1O55055 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdmt1O55055 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trdmt1O55055 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trdmt1O55055 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdmt1O55055 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdmt1O55055 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trdmt1O55055 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.57■□□□□ 0.88
Trdmt1O55055 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trdmt1O55055 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdmt1O55055 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trdmt1O55055 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trdmt1O55055 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trdmt1O55055 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trdmt1O55055 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trdmt1O55055 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trdmt1O55055 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trdmt1O55055 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trdmt1O55055 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trdmt1O55055 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trdmt1O55055 Mtag2-201ENSMUST00000058665 714 ntBASIC20.56■□□□□ 0.88
Trdmt1O55055 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trdmt1O55055 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trdmt1O55055 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trdmt1O55055 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trdmt1O55055 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trdmt1O55055 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trdmt1O55055 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trdmt1O55055 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trdmt1O55055 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trdmt1O55055 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trdmt1O55055 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trdmt1O55055 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trdmt1O55055 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.55■□□□□ 0.88
Trdmt1O55055 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trdmt1O55055 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trdmt1O55055 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trdmt1O55055 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trdmt1O55055 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trdmt1O55055 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trdmt1O55055 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trdmt1O55055 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trdmt1O55055 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trdmt1O55055 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trdmt1O55055 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trdmt1O55055 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trdmt1O55055 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.54■□□□□ 0.88
Trdmt1O55055 Mir5122-201ENSMUST00000175004 89 ntBASIC20.54■□□□□ 0.88
Trdmt1O55055 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trdmt1O55055 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trdmt1O55055 Zfp783-201ENSMUST00000095946 670 ntBASIC20.54■□□□□ 0.88
Trdmt1O55055 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trdmt1O55055 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trdmt1O55055 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trdmt1O55055 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trdmt1O55055 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trdmt1O55055 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.53■□□□□ 0.88
Trdmt1O55055 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Trdmt1O55055 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.53■□□□□ 0.88
Trdmt1O55055 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.53■□□□□ 0.88
Trdmt1O55055 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trdmt1O55055 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trdmt1O55055 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trdmt1O55055 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms