Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ChkaO54804 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ChkaO54804 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.79■□□□□ 0.6
ChkaO54804 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ChkaO54804 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ChkaO54804 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ChkaO54804 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ChkaO54804 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.78■□□□□ 0.6
ChkaO54804 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChkaO54804 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChkaO54804 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChkaO54804 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ChkaO54804 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChkaO54804 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChkaO54804 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChkaO54804 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChkaO54804 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChkaO54804 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChkaO54804 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ChkaO54804 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChkaO54804 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChkaO54804 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChkaO54804 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChkaO54804 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.77■□□□□ 0.6
ChkaO54804 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ChkaO54804 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ChkaO54804 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChkaO54804 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ChkaO54804 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.77■□□□□ 0.6
ChkaO54804 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChkaO54804 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
ChkaO54804 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.77■□□□□ 0.59
ChkaO54804 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ChkaO54804 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ChkaO54804 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.76■□□□□ 0.59
ChkaO54804 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ChkaO54804 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ChkaO54804 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ChkaO54804 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ChkaO54804 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ChkaO54804 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ChkaO54804 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ChkaO54804 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.76■□□□□ 0.59
ChkaO54804 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ChkaO54804 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ChkaO54804 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.76■□□□□ 0.59
ChkaO54804 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ChkaO54804 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ChkaO54804 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ChkaO54804 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ChkaO54804 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.76■□□□□ 0.59
ChkaO54804 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChkaO54804 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChkaO54804 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChkaO54804 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.75■□□□□ 0.59
ChkaO54804 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChkaO54804 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChkaO54804 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.75■□□□□ 0.59
ChkaO54804 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChkaO54804 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.75■□□□□ 0.59
ChkaO54804 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChkaO54804 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ChkaO54804 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChkaO54804 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChkaO54804 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ChkaO54804 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.74■□□□□ 0.59
ChkaO54804 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChkaO54804 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ChkaO54804 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChkaO54804 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
ChkaO54804 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChkaO54804 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChkaO54804 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ChkaO54804 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChkaO54804 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChkaO54804 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChkaO54804 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChkaO54804 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.73■□□□□ 0.59
ChkaO54804 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.73■□□□□ 0.59
ChkaO54804 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ChkaO54804 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.73■□□□□ 0.59
ChkaO54804 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChkaO54804 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChkaO54804 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.72■□□□□ 0.59
ChkaO54804 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.72■□□□□ 0.59
ChkaO54804 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChkaO54804 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ChkaO54804 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms