Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.63■□□□□ 0.57
Phox2bO35690 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phox2bO35690 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.63■□□□□ 0.57
Phox2bO35690 Gm5867-201ENSMUST00000063197 592 ntBASIC18.63■□□□□ 0.57
Phox2bO35690 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phox2bO35690 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Phox2bO35690 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.63■□□□□ 0.57
Phox2bO35690 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phox2bO35690 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Phox2bO35690 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Phox2bO35690 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Phox2bO35690 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Phox2bO35690 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Phox2bO35690 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Phox2bO35690 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Phox2bO35690 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Phox2bO35690 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Phox2bO35690 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.62■□□□□ 0.57
Phox2bO35690 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Phox2bO35690 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Phox2bO35690 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Phox2bO35690 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Phox2bO35690 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Phox2bO35690 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Phox2bO35690 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.61■□□□□ 0.57
Phox2bO35690 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Phox2bO35690 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Phox2bO35690 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Phox2bO35690 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.6■□□□□ 0.57
Phox2bO35690 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.6■□□□□ 0.57
Phox2bO35690 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Ank2-226ENSMUST00000189368 339 ntBASIC18.6■□□□□ 0.57
Phox2bO35690 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Gm30025-201ENSMUST00000218555 728 ntBASIC18.6■□□□□ 0.57
Phox2bO35690 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.6■□□□□ 0.57
Phox2bO35690 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Phox2bO35690 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Phox2bO35690 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Phox2bO35690 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Phox2bO35690 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Phox2bO35690 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.59■□□□□ 0.57
Phox2bO35690 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Phox2bO35690 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.59■□□□□ 0.57
Phox2bO35690 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Phox2bO35690 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Phox2bO35690 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Phox2bO35690 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Phox2bO35690 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.58■□□□□ 0.57
Phox2bO35690 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Phox2bO35690 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Phox2bO35690 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Phox2bO35690 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Phox2bO35690 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Phox2bO35690 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Phox2bO35690 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Phox2bO35690 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Phox2bO35690 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Phox2bO35690 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Phox2bO35690 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Phox2bO35690 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Phox2bO35690 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Phox2bO35690 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Phox2bO35690 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Phox2bO35690 Gm13559-201ENSMUST00000120476 863 ntBASIC18.57■□□□□ 0.56
Phox2bO35690 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Phox2bO35690 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Phox2bO35690 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Phox2bO35690 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.57■□□□□ 0.56
Phox2bO35690 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Phox2bO35690 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Phox2bO35690 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Phox2bO35690 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Phox2bO35690 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Phox2bO35690 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Phox2bO35690 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Phox2bO35690 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Phox2bO35690 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Phox2bO35690 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Phox2bO35690 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Phox2bO35690 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Phox2bO35690 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Phox2bO35690 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Phox2bO35690 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Phox2bO35690 Gm23634-201ENSMUST00000175071 91 ntBASIC18.56■□□□□ 0.56
Phox2bO35690 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.56■□□□□ 0.56
Phox2bO35690 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.56■□□□□ 0.56
Phox2bO35690 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Phox2bO35690 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms