Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gfra3O35118 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Gfra3O35118 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gfra3O35118 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Gfra3O35118 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Gfra3O35118 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gfra3O35118 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.07■□□□□ 0.16
Gfra3O35118 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gfra3O35118 Gm4968-201ENSMUST00000071458 858 ntBASIC16.07■□□□□ 0.16
Gfra3O35118 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gfra3O35118 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gfra3O35118 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gfra3O35118 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gfra3O35118 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gfra3O35118 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gfra3O35118 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gfra3O35118 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.06■□□□□ 0.16
Gfra3O35118 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.06■□□□□ 0.16
Gfra3O35118 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Gfra3O35118 Gm12441-201ENSMUST00000121806 588 ntBASIC16.06■□□□□ 0.16
Gfra3O35118 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.06■□□□□ 0.16
Gfra3O35118 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gfra3O35118 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.05■□□□□ 0.16
Gfra3O35118 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.05■□□□□ 0.16
Gfra3O35118 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Gm27011-201ENSMUST00000182352 972 ntBASIC16.05■□□□□ 0.16
Gfra3O35118 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Gfra3O35118 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Gfra3O35118 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Gfra3O35118 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gfra3O35118 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.04■□□□□ 0.16
Gfra3O35118 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gfra3O35118 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gfra3O35118 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gfra3O35118 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gfra3O35118 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gfra3O35118 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Gfra3O35118 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.04■□□□□ 0.16
Gfra3O35118 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gfra3O35118 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gfra3O35118 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gfra3O35118 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gfra3O35118 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gfra3O35118 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gfra3O35118 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
Gfra3O35118 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gfra3O35118 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Gfra3O35118 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.03■□□□□ 0.16
Gfra3O35118 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gfra3O35118 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.03■□□□□ 0.16
Gfra3O35118 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.03■□□□□ 0.16
Gfra3O35118 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Gfra3O35118 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.03■□□□□ 0.16
Gfra3O35118 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gfra3O35118 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gfra3O35118 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gfra3O35118 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gfra3O35118 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gfra3O35118 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gfra3O35118 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gfra3O35118 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gfra3O35118 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Gfra3O35118 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gfra3O35118 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gfra3O35118 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gfra3O35118 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Gfra3O35118 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gfra3O35118 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Gfra3O35118 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.02■□□□□ 0.15
Gfra3O35118 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gfra3O35118 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gfra3O35118 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gfra3O35118 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gfra3O35118 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gfra3O35118 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gfra3O35118 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gfra3O35118 Gm26524-201ENSMUST00000192339 390 ntBASIC16.01■□□□□ 0.15
Gfra3O35118 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.01■□□□□ 0.15
Gfra3O35118 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms