Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scarb2O35114 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb2O35114 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb2O35114 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scarb2O35114 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.33■□□□□ 0.37
Scarb2O35114 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scarb2O35114 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scarb2O35114 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.33■□□□□ 0.37
Scarb2O35114 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Scarb2O35114 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarb2O35114 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Scarb2O35114 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarb2O35114 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scarb2O35114 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.33■□□□□ 0.36
Scarb2O35114 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb2O35114 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb2O35114 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.32■□□□□ 0.36
Scarb2O35114 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb2O35114 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb2O35114 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb2O35114 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb2O35114 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb2O35114 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb2O35114 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb2O35114 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb2O35114 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Scarb2O35114 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.31■□□□□ 0.36
Scarb2O35114 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb2O35114 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb2O35114 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.31■□□□□ 0.36
Scarb2O35114 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb2O35114 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.31■□□□□ 0.36
Scarb2O35114 Gm9988-201ENSMUST00000069786 435 ntBASIC17.31■□□□□ 0.36
Scarb2O35114 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.31■□□□□ 0.36
Scarb2O35114 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb2O35114 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb2O35114 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb2O35114 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb2O35114 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb2O35114 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb2O35114 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb2O35114 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb2O35114 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb2O35114 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.3■□□□□ 0.36
Scarb2O35114 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb2O35114 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb2O35114 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb2O35114 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb2O35114 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb2O35114 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb2O35114 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb2O35114 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
Scarb2O35114 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Scarb2O35114 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb2O35114 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.3■□□□□ 0.36
Scarb2O35114 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Scarb2O35114 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scarb2O35114 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Scarb2O35114 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.29■□□□□ 0.36
Scarb2O35114 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Scarb2O35114 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Scarb2O35114 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.29■□□□□ 0.36
Scarb2O35114 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb2O35114 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Scarb2O35114 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Scarb2O35114 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Scarb2O35114 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.28■□□□□ 0.36
Scarb2O35114 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.28■□□□□ 0.36
Scarb2O35114 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb2O35114 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms