Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.05■□□□□ 0.64
Trove2O08848 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trove2O08848 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trove2O08848 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trove2O08848 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trove2O08848 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.04■□□□□ 0.64
Trove2O08848 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.04■□□□□ 0.64
Trove2O08848 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trove2O08848 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trove2O08848 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trove2O08848 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Trove2O08848 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trove2O08848 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trove2O08848 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trove2O08848 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trove2O08848 AA386476-201ENSMUST00000098781 1665 ntBASIC19.04■□□□□ 0.64
Trove2O08848 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trove2O08848 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trove2O08848 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trove2O08848 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trove2O08848 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trove2O08848 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trove2O08848 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trove2O08848 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trove2O08848 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trove2O08848 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trove2O08848 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trove2O08848 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Trove2O08848 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trove2O08848 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trove2O08848 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trove2O08848 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.02■□□□□ 0.64
Trove2O08848 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.02■□□□□ 0.64
Trove2O08848 Gm21956-201ENSMUST00000179946 522 ntBASIC19.02■□□□□ 0.64
Trove2O08848 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.02■□□□□ 0.64
Trove2O08848 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trove2O08848 Gm43137-201ENSMUST00000198052 594 ntBASIC19.02■□□□□ 0.64
Trove2O08848 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trove2O08848 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Trove2O08848 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trove2O08848 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trove2O08848 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trove2O08848 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trove2O08848 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trove2O08848 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.01■□□□□ 0.63
Trove2O08848 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trove2O08848 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trove2O08848 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trove2O08848 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trove2O08848 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trove2O08848 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trove2O08848 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trove2O08848 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trove2O08848 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trove2O08848 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19■□□□□ 0.63
Trove2O08848 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19■□□□□ 0.63
Trove2O08848 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Gm37352-201ENSMUST00000193908 2181 ntBASIC19■□□□□ 0.63
Trove2O08848 Gm43548-201ENSMUST00000197139 2353 ntBASIC19■□□□□ 0.63
Trove2O08848 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trove2O08848 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19■□□□□ 0.63
Trove2O08848 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trove2O08848 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trove2O08848 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trove2O08848 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trove2O08848 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trove2O08848 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.99■□□□□ 0.63
Trove2O08848 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.99■□□□□ 0.63
Trove2O08848 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trove2O08848 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trove2O08848 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trove2O08848 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.99■□□□□ 0.63
Trove2O08848 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trove2O08848 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trove2O08848 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trove2O08848 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms