Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ebf3O08791 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf3O08791 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.27■□□□□ 0.68
Ebf3O08791 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf3O08791 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.27■□□□□ 0.67
Ebf3O08791 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ebf3O08791 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ebf3O08791 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf3O08791 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf3O08791 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf3O08791 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.26■□□□□ 0.67
Ebf3O08791 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf3O08791 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf3O08791 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf3O08791 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf3O08791 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf3O08791 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ebf3O08791 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.25■□□□□ 0.67
Ebf3O08791 Gm12896-201ENSMUST00000118430 226 ntBASIC19.25■□□□□ 0.67
Ebf3O08791 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.25■□□□□ 0.67
Ebf3O08791 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ebf3O08791 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf3O08791 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ebf3O08791 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf3O08791 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf3O08791 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf3O08791 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf3O08791 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.24■□□□□ 0.67
Ebf3O08791 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf3O08791 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ebf3O08791 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.24■□□□□ 0.67
Ebf3O08791 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf3O08791 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.24■□□□□ 0.67
Ebf3O08791 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf3O08791 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf3O08791 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ebf3O08791 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.23■□□□□ 0.67
Ebf3O08791 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.23■□□□□ 0.67
Ebf3O08791 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.23■□□□□ 0.67
Ebf3O08791 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf3O08791 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf3O08791 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf3O08791 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ebf3O08791 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ebf3O08791 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf3O08791 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf3O08791 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ebf3O08791 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.22■□□□□ 0.67
Ebf3O08791 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf3O08791 Mir7071-201ENSMUST00000184847 69 ntBASIC19.22■□□□□ 0.67
Ebf3O08791 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf3O08791 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ebf3O08791 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf3O08791 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf3O08791 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf3O08791 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf3O08791 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.21■□□□□ 0.67
Ebf3O08791 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.21■□□□□ 0.67
Ebf3O08791 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Ebf3O08791 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ebf3O08791 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ebf3O08791 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf3O08791 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
Ebf3O08791 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.2■□□□□ 0.66
Ebf3O08791 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.2■□□□□ 0.66
Ebf3O08791 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ebf3O08791 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.2■□□□□ 0.66
Ebf3O08791 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf3O08791 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.2■□□□□ 0.66
Ebf3O08791 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf3O08791 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf3O08791 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ebf3O08791 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf3O08791 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms