Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cdhr4H3BJZ2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdhr4H3BJZ2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Cdhr4H3BJZ2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdhr4H3BJZ2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdhr4H3BJZ2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr4H3BJZ2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr4H3BJZ2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms