Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Gm27454-201ENSMUST00000185090 204 ntBASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Gm12821-201ENSMUST00000120022 600 ntBASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn20G5E8X0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cldn20G5E8X0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn20G5E8X0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn20G5E8X0 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.13■□□□□ 0.17
Cldn20G5E8X0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn20G5E8X0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn20G5E8X0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn20G5E8X0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cldn20G5E8X0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn20G5E8X0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn20G5E8X0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn20G5E8X0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn20G5E8X0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.12■□□□□ 0.17
Cldn20G5E8X0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn20G5E8X0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.11■□□□□ 0.17
Cldn20G5E8X0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn20G5E8X0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn20G5E8X0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cldn20G5E8X0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn20G5E8X0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Cldn20G5E8X0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn20G5E8X0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cldn20G5E8X0 Gm45417-201ENSMUST00000209533 758 ntBASIC16.1■□□□□ 0.17
Cldn20G5E8X0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn20G5E8X0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.1■□□□□ 0.17
Cldn20G5E8X0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn20G5E8X0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.1■□□□□ 0.17
Cldn20G5E8X0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms