Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Gm24589-201ENSMUST00000116692 94 ntBASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Gm27463-201ENSMUST00000183569 57 ntBASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Gm2274-201ENSMUST00000184539 609 ntBASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Ccdc188F6WEU2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc188F6WEU2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 Gm12085-201ENSMUST00000119263 940 ntBASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc188F6WEU2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc188F6WEU2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.9■□□□□ 0.62
Ccdc188F6WEU2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc188F6WEU2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Ccdc188F6WEU2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 Gm18958-201ENSMUST00000174258 762 ntBASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 Gm29518-201ENSMUST00000190858 372 ntBASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc188F6WEU2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms