Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atf6F6VAN0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6F6VAN0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Gm13146-201ENSMUST00000118508 780 ntBASIC19.1■□□□□ 0.65
Atf6F6VAN0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.1■□□□□ 0.65
Atf6F6VAN0 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.1■□□□□ 0.65
Atf6F6VAN0 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.1■□□□□ 0.65
Atf6F6VAN0 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.1■□□□□ 0.65
Atf6F6VAN0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Gm10493-201ENSMUST00000097270 612 ntBASIC19.1■□□□□ 0.65
Atf6F6VAN0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Atf6F6VAN0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf6F6VAN0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Atf6F6VAN0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atf6F6VAN0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atf6F6VAN0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atf6F6VAN0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atf6F6VAN0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf6F6VAN0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf6F6VAN0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Atf6F6VAN0 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.08■□□□□ 0.64
Atf6F6VAN0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Atf6F6VAN0 Gm42778-201ENSMUST00000199644 553 ntBASIC19.08■□□□□ 0.64
Atf6F6VAN0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf6F6VAN0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Atf6F6VAN0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Atf6F6VAN0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf6F6VAN0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf6F6VAN0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Atf6F6VAN0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf6F6VAN0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf6F6VAN0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf6F6VAN0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.05■□□□□ 0.64
Atf6F6VAN0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Atf6F6VAN0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf6F6VAN0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf6F6VAN0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf6F6VAN0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf6F6VAN0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf6F6VAN0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Atf6F6VAN0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.05■□□□□ 0.64
Atf6F6VAN0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf6F6VAN0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf6F6VAN0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Atf6F6VAN0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.04■□□□□ 0.64
Atf6F6VAN0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6F6VAN0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6F6VAN0 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.04■□□□□ 0.64
Atf6F6VAN0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6F6VAN0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6F6VAN0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6F6VAN0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6F6VAN0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6F6VAN0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf6F6VAN0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.04■□□□□ 0.64
Atf6F6VAN0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Atf6F6VAN0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms