Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Gm13168-201ENSMUST00000121771 632 ntBASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh17E9PXF0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdh17E9PXF0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Trmt13-210ENSMUST00000198454 880 ntBASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh17E9PXF0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh17E9PXF0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh17E9PXF0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh17E9PXF0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdh17E9PXF0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdh17E9PXF0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh17E9PXF0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh17E9PXF0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh17E9PXF0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh17E9PXF0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh17E9PXF0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdh17E9PXF0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh17E9PXF0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh17E9PXF0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh17E9PXF0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh17E9PXF0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh17E9PXF0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms