Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.69■□□□□ 0.1
Mmp27D3YV89 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.69■□□□□ 0.1
Mmp27D3YV89 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mmp27D3YV89 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp27D3YV89 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp27D3YV89 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp27D3YV89 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp27D3YV89 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Mmp27D3YV89 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.68■□□□□ 0.1
Mmp27D3YV89 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp27D3YV89 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Mmp27D3YV89 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp27D3YV89 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp27D3YV89 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp27D3YV89 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp27D3YV89 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp27D3YV89 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
Mmp27D3YV89 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.67■□□□□ 0.1
Mmp27D3YV89 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp27D3YV89 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp27D3YV89 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Mir6236-201ENSMUST00000184437 123 ntBASIC15.65■□□□□ 0.1
Mmp27D3YV89 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.65■□□□□ 0.1
Mmp27D3YV89 Gm8493-201ENSMUST00000196881 489 ntBASIC15.65■□□□□ 0.1
Mmp27D3YV89 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp27D3YV89 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Mmp27D3YV89 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp27D3YV89 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Mmp27D3YV89 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp27D3YV89 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp27D3YV89 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms