Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.23■□□□□ 0.03
Chd6A3KFM7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd6A3KFM7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Gm27459-201ENSMUST00000184860 107 ntBASIC15.23■□□□□ 0.03
Chd6A3KFM7 Gm5864-201ENSMUST00000202263 970 ntBASIC15.23■□□□□ 0.03
Chd6A3KFM7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Birc2-201ENSMUST00000054878 378 ntBASIC15.22■□□□□ 0.03
Chd6A3KFM7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.22■□□□□ 0.03
Chd6A3KFM7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd6A3KFM7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chd6A3KFM7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd6A3KFM7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd6A3KFM7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.21■□□□□ 0.03
Chd6A3KFM7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd6A3KFM7 Gm7860-201ENSMUST00000121190 879 ntBASIC15.21■□□□□ 0.03
Chd6A3KFM7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.21■□□□□ 0.03
Chd6A3KFM7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.21■□□□□ 0.03
Chd6A3KFM7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd6A3KFM7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd6A3KFM7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd6A3KFM7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.21■□□□□ 0.02
Chd6A3KFM7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd6A3KFM7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.21■□□□□ 0.02
Chd6A3KFM7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.2■□□□□ 0.02
Chd6A3KFM7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.2■□□□□ 0.02
Chd6A3KFM7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.2■□□□□ 0.02
Chd6A3KFM7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd6A3KFM7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Mir8098-201ENSMUST00000184011 137 ntBASIC15.19■□□□□ 0.02
Chd6A3KFM7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Gm11594-201ENSMUST00000122313 162 ntBASIC15.19■□□□□ 0.02
Chd6A3KFM7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd6A3KFM7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.19■□□□□ 0.02
Chd6A3KFM7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd6A3KFM7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.18■□□□□ 0.02
Chd6A3KFM7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Chd6A3KFM7 Auts2-212ENSMUST00000178555 309 ntBASIC15.18■□□□□ 0.02
Chd6A3KFM7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd6A3KFM7 Gm5587-201ENSMUST00000206270 674 ntBASIC15.18■□□□□ 0.02
Chd6A3KFM7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd6A3KFM7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd6A3KFM7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd6A3KFM7 Gm18733-201ENSMUST00000173950 856 ntBASIC15.18■□□□□ 0.02
Chd6A3KFM7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd6A3KFM7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd6A3KFM7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd6A3KFM7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd6A3KFM7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd6A3KFM7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.17■□□□□ 0.02
Chd6A3KFM7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Chd6A3KFM7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd6A3KFM7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd6A3KFM7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chd6A3KFM7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd6A3KFM7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms