Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.91■□□□□ 0.94
Scn3aA2ASI5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn3aA2ASI5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn3aA2ASI5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Scn3aA2ASI5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn3aA2ASI5 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.91■□□□□ 0.94
Scn3aA2ASI5 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.91■□□□□ 0.94
Scn3aA2ASI5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn3aA2ASI5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scn3aA2ASI5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Scn3aA2ASI5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scn3aA2ASI5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Scn3aA2ASI5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn3aA2ASI5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.9■□□□□ 0.94
Scn3aA2ASI5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn3aA2ASI5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn3aA2ASI5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn3aA2ASI5 Gm715-201ENSMUST00000117865 831 ntBASIC20.9■□□□□ 0.94
Scn3aA2ASI5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scn3aA2ASI5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.9■□□□□ 0.94
Scn3aA2ASI5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scn3aA2ASI5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Scn3aA2ASI5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scn3aA2ASI5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scn3aA2ASI5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scn3aA2ASI5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Scn3aA2ASI5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scn3aA2ASI5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Scn3aA2ASI5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.89■□□□□ 0.93
Scn3aA2ASI5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scn3aA2ASI5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn3aA2ASI5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn3aA2ASI5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scn3aA2ASI5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Scn3aA2ASI5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Scn3aA2ASI5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn3aA2ASI5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn3aA2ASI5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn3aA2ASI5 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.87■□□□□ 0.93
Scn3aA2ASI5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn3aA2ASI5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn3aA2ASI5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.87■□□□□ 0.93
Scn3aA2ASI5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Mir1199-201ENSMUST00000117015 119 ntBASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Mir7071-201ENSMUST00000184847 69 ntBASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Mtag2-201ENSMUST00000058665 714 ntBASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn3aA2ASI5 Gm15378-201ENSMUST00000121894 207 ntBASIC20.85■□□□□ 0.93
Scn3aA2ASI5 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.85■□□□□ 0.93
Scn3aA2ASI5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn3aA2ASI5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Gm18666-201ENSMUST00000190039 958 ntBASIC20.84■□□□□ 0.93
Scn3aA2ASI5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Flg-201ENSMUST00000050758 1488 ntBASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Scn3aA2ASI5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn3aA2ASI5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn3aA2ASI5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Scn3aA2ASI5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.83■□□□□ 0.93
Scn3aA2ASI5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn3aA2ASI5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn3aA2ASI5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Scn3aA2ASI5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn3aA2ASI5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Scn3aA2ASI5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn3aA2ASI5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms