Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.63■□□□□ 0.73
Scn1aA2APX8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn1aA2APX8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn1aA2APX8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Scn1aA2APX8 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.63■□□□□ 0.73
Scn1aA2APX8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn1aA2APX8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn1aA2APX8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn1aA2APX8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn1aA2APX8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn1aA2APX8 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.62■□□□□ 0.73
Scn1aA2APX8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn1aA2APX8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Scn1aA2APX8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Gm27275-201ENSMUST00000184318 272 ntBASIC19.61■□□□□ 0.73
Scn1aA2APX8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1aA2APX8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1aA2APX8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1aA2APX8 Gm22325-201ENSMUST00000158904 308 ntBASIC19.6■□□□□ 0.73
Scn1aA2APX8 Gm44549-201ENSMUST00000208351 577 ntBASIC19.6■□□□□ 0.73
Scn1aA2APX8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1aA2APX8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1aA2APX8 Iqck-206ENSMUST00000208658 2891 ntBASIC19.6■□□□□ 0.73
Scn1aA2APX8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1aA2APX8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn1aA2APX8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.59■□□□□ 0.73
Scn1aA2APX8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn1aA2APX8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn1aA2APX8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn1aA2APX8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn1aA2APX8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn1aA2APX8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn1aA2APX8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Scn1aA2APX8 Trmt13-210ENSMUST00000198454 880 ntBASIC19.59■□□□□ 0.73
Scn1aA2APX8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn1aA2APX8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn1aA2APX8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Scn1aA2APX8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn1aA2APX8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn1aA2APX8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.58■□□□□ 0.73
Scn1aA2APX8 Gm2399-201ENSMUST00000104944 225 ntBASIC19.58■□□□□ 0.73
Scn1aA2APX8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn1aA2APX8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scn1aA2APX8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scn1aA2APX8 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.58■□□□□ 0.72
Scn1aA2APX8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scn1aA2APX8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Scn1aA2APX8 BC021767-201ENSMUST00000126387 1716 ntBASIC19.57■□□□□ 0.72
Scn1aA2APX8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1aA2APX8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Scn1aA2APX8 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.56■□□□□ 0.72
Scn1aA2APX8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn1aA2APX8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn1aA2APX8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn1aA2APX8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn1aA2APX8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn1aA2APX8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.56■□□□□ 0.72
Scn1aA2APX8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.55■□□□□ 0.72
Scn1aA2APX8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.55■□□□□ 0.72
Scn1aA2APX8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1aA2APX8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1aA2APX8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.54■□□□□ 0.72
Scn1aA2APX8 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.54■□□□□ 0.72
Scn1aA2APX8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms