Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm37415-201ENSMUST00000192265 2054 ntBASIC9.94□□□□□ -0.82
Ubr4A2AN08 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Gm43767-201ENSMUST00000198933 381 ntBASIC9.94□□□□□ -0.82
Ubr4A2AN08 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ubr4A2AN08 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Gm18733-201ENSMUST00000173950 856 ntBASIC9.93□□□□□ -0.82
Ubr4A2AN08 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ubr4A2AN08 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Gm4217-201ENSMUST00000182243 1002 ntBASIC9.92□□□□□ -0.82
Ubr4A2AN08 Gm27321-201ENSMUST00000185021 205 ntBASIC9.92□□□□□ -0.82
Ubr4A2AN08 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC9.92□□□□□ -0.82
Ubr4A2AN08 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ubr4A2AN08 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Gm37292-201ENSMUST00000192062 758 ntBASIC9.91□□□□□ -0.82
Ubr4A2AN08 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ubr4A2AN08 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Gm7860-201ENSMUST00000121190 879 ntBASIC9.9□□□□□ -0.82
Ubr4A2AN08 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ubr4A2AN08 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms