Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Gm13836-201ENSMUST00000121159 501 ntBASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3854A0A1B0GSS6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gm3854A0A1B0GSS6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Gm3854A0A1B0GSS6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3854A0A1B0GSS6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Gm3854A0A1B0GSS6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3854A0A1B0GSS6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3854A0A1B0GSS6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Gm3854A0A1B0GSS6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3854A0A1B0GSS6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3854A0A1B0GSS6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3854A0A1B0GSS6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3854A0A1B0GSS6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3854A0A1B0GSS6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3854A0A1B0GSS6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3854A0A1B0GSS6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.62■□□□□ 0.57
Gm3854A0A1B0GSS6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3854A0A1B0GSS6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3854A0A1B0GSS6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3854A0A1B0GSS6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3854A0A1B0GSS6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Gm3854A0A1B0GSS6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3854A0A1B0GSS6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3854A0A1B0GSS6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3854A0A1B0GSS6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3854A0A1B0GSS6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3854A0A1B0GSS6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3854A0A1B0GSS6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.61■□□□□ 0.57
Gm3854A0A1B0GSS6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3854A0A1B0GSS6 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.61■□□□□ 0.57
Gm3854A0A1B0GSS6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3854A0A1B0GSS6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3854A0A1B0GSS6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3854A0A1B0GSS6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm3854A0A1B0GSS6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Flg-201ENSMUST00000050758 1488 ntBASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm3854A0A1B0GSS6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3854A0A1B0GSS6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3854A0A1B0GSS6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3854A0A1B0GSS6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3854A0A1B0GSS6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3854A0A1B0GSS6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms