Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gm38205-201ENSMUST00000192243 258 ntBASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lcmt1A0A0U1RNF2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Lcmt1A0A0U1RNF2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.62■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.62■□□□□ 0.89
Lcmt1A0A0U1RNF2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lcmt1A0A0U1RNF2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lcmt1A0A0U1RNF2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Lcmt1A0A0U1RNF2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lcmt1A0A0U1RNF2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.61■□□□□ 0.89
Lcmt1A0A0U1RNF2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lcmt1A0A0U1RNF2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lcmt1A0A0U1RNF2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Lcmt1A0A0U1RNF2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gm13146-201ENSMUST00000118508 780 ntBASIC20.61■□□□□ 0.89
Lcmt1A0A0U1RNF2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.61■□□□□ 0.89
Lcmt1A0A0U1RNF2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lcmt1A0A0U1RNF2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lcmt1A0A0U1RNF2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lcmt1A0A0U1RNF2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Lcmt1A0A0U1RNF2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gm13234-201ENSMUST00000120010 747 ntBASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lcmt1A0A0U1RNF2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Gm42778-201ENSMUST00000199644 553 ntBASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.58■□□□□ 0.89
Lcmt1A0A0U1RNF2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lcmt1A0A0U1RNF2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lcmt1A0A0U1RNF2 Reep4-203ENSMUST00000226563 1444 ntBASIC20.58■□□□□ 0.88
Lcmt1A0A0U1RNF2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lcmt1A0A0U1RNF2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lcmt1A0A0U1RNF2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lcmt1A0A0U1RNF2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lcmt1A0A0U1RNF2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lcmt1A0A0U1RNF2 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.57■□□□□ 0.88
Lcmt1A0A0U1RNF2 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.57■□□□□ 0.88
Lcmt1A0A0U1RNF2 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.57■□□□□ 0.88
Lcmt1A0A0U1RNF2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.57■□□□□ 0.88
Lcmt1A0A0U1RNF2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Lcmt1A0A0U1RNF2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.57■□□□□ 0.88
Lcmt1A0A0U1RNF2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms