Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn2aA0A0J9YTW6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scn2aA0A0J9YTW6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2aA0A0J9YTW6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2aA0A0J9YTW6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2aA0A0J9YTW6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2aA0A0J9YTW6 Gm10602-201ENSMUST00000098239 609 ntBASIC17.12■□□□□ 0.33
Scn2aA0A0J9YTW6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Scn2aA0A0J9YTW6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2aA0A0J9YTW6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scn2aA0A0J9YTW6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.12■□□□□ 0.33
Scn2aA0A0J9YTW6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn2aA0A0J9YTW6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn2aA0A0J9YTW6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scn2aA0A0J9YTW6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn2aA0A0J9YTW6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Scn2aA0A0J9YTW6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.08■□□□□ 0.33
Scn2aA0A0J9YTW6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2aA0A0J9YTW6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2aA0A0J9YTW6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.08■□□□□ 0.32
Scn2aA0A0J9YTW6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.08■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Scn2aA0A0J9YTW6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Scn2aA0A0J9YTW6 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.07■□□□□ 0.32
Scn2aA0A0J9YTW6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms