Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Gm12922-201ENSMUST00000120626 809 ntBASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Grk6-206ENSMUST00000224995 2971 ntBASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-4A0A0G2JFX3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms