Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gm13146-201ENSMUST00000118508 780 ntBASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gm7860-201ENSMUST00000121190 879 ntBASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Mir5133-201ENSMUST00000174955 77 ntBASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.4□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13n-1A0A0G2JEU8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms