Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9-4A0A0B4J1K2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9-4A0A0B4J1K2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9-4A0A0B4J1K2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9-4A0A0B4J1K2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm10849-201ENSMUST00000100397 618 ntBASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Nespas-201ENSMUST00000143738 1083 ntBASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9-4A0A0B4J1K2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm6420-201ENSMUST00000193885 723 ntBASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9-4A0A0B4J1K2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9-4A0A0B4J1K2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Gm27405-201ENSMUST00000184201 112 ntBASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav9-4A0A0B4J1K2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms