Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Dio3-201ENSMUST00000097228 1449 ntBASIC19.08■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.08■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Igkv5-43A0A0B4J1J2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm12896-201ENSMUST00000118430 226 ntBASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm20760-201ENSMUST00000179197 648 ntBASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm22325-201ENSMUST00000158904 308 ntBASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.07■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm27275-201ENSMUST00000184318 272 ntBASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm2559-201ENSMUST00000201323 363 ntBASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv5-43A0A0B4J1J2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Igkv5-43A0A0B4J1J2 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.05■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv5-43A0A0B4J1J2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.05■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.04■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.04■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Trmt13-210ENSMUST00000198454 880 ntBASIC19.04■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.03■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.02■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.02■□□□□ 0.64
Igkv5-43A0A0B4J1J2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Igkv5-43A0A0B4J1J2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Igkv5-43A0A0B4J1J2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igkv5-43A0A0B4J1J2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms