Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv20A0A0B4J1H5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv20A0A0B4J1H5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv20A0A0B4J1H5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv20A0A0B4J1H5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv20A0A0B4J1H5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv20A0A0B4J1H5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv20A0A0B4J1H5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv20A0A0B4J1H5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trbv20A0A0B4J1H5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trbv20A0A0B4J1H5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv20A0A0B4J1H5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv20A0A0B4J1H5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv20A0A0B4J1H5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms