Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trbc1A0A0A6YWV4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbc1A0A0A6YWV4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbc1A0A0A6YWV4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbc1A0A0A6YWV4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbc1A0A0A6YWV4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trbc1A0A0A6YWV4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trbc1A0A0A6YWV4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbc1A0A0A6YWV4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trbc1A0A0A6YWV4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trbc1A0A0A6YWV4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Trbc1A0A0A6YWV4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbc1A0A0A6YWV4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbc1A0A0A6YWV4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbc1A0A0A6YWV4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbc1A0A0A6YWV4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbc1A0A0A6YWV4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbc1A0A0A6YWV4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbc1A0A0A6YWV4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.01■□□□□ 0.31
Trbc1A0A0A6YWV4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbc1A0A0A6YWV4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trbc1A0A0A6YWV4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbc1A0A0A6YWV4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbc1A0A0A6YWV4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbc1A0A0A6YWV4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbc1A0A0A6YWV4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbc1A0A0A6YWV4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbc1A0A0A6YWV4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms