Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav21-dv12A0A075B6C4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav21-dv12A0A075B6C4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Trav21-dv12A0A075B6C4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav21-dv12A0A075B6C4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav21-dv12A0A075B6C4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav21-dv12A0A075B6C4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav21-dv12A0A075B6C4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav21-dv12A0A075B6C4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav21-dv12A0A075B6C4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav21-dv12A0A075B6C4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav21-dv12A0A075B6C4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav21-dv12A0A075B6C4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav21-dv12A0A075B6C4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav21-dv12A0A075B6C4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav21-dv12A0A075B6C4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav21-dv12A0A075B6C4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms