Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-3A0A075B6A4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12d-3A0A075B6A4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.9□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.9□□□□□ -0.19
Trav12d-3A0A075B6A4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav12d-3A0A075B6A4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm8969-201ENSMUST00000199694 526 ntBASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12d-3A0A075B6A4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav12d-3A0A075B6A4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav12d-3A0A075B6A4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms