Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-4A0A075B652 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-4A0A075B652 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-4A0A075B652 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-4A0A075B652 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav5-4A0A075B652 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms