Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-3A0A075B648 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-3A0A075B648 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trav12-3A0A075B648 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.58□□□□□ -0.24
Trav12-3A0A075B648 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-3A0A075B648 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav12-3A0A075B648 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav12-3A0A075B648 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-3A0A075B648 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-3A0A075B648 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav12-3A0A075B648 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-3A0A075B648 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-3A0A075B648 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-3A0A075B648 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 AC167019.3-201ENSMUST00000228225 1266 ntBASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-3A0A075B648 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Haglr-201ENSMUST00000100000 2085 ntBASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Gm6821-201ENSMUST00000107540 542 ntBASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-3A0A075B648 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12-3A0A075B648 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms