Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-7-dv9A0A075B639 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-7-dv9A0A075B639 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-7-dv9A0A075B639 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-7-dv9A0A075B639 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav6-7-dv9A0A075B639 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm9988-201ENSMUST00000069786 435 ntBASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav6-7-dv9A0A075B639 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav6-7-dv9A0A075B639 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-7-dv9A0A075B639 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-7-dv9A0A075B639 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav6-7-dv9A0A075B639 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trav6-7-dv9A0A075B639 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-7-dv9A0A075B639 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.49■□□□□ 0.23
Trav6-7-dv9A0A075B639 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-7-dv9A0A075B639 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-7-dv9A0A075B639 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-7-dv9A0A075B639 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.49■□□□□ 0.23
Trav6-7-dv9A0A075B639 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-7-dv9A0A075B639 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-7-dv9A0A075B639 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Trav6-7-dv9A0A075B639 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms