Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4d-3A0A075B625 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4d-3A0A075B625 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4d-3A0A075B625 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Gm10399-202ENSMUST00000202768 748 ntBASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4d-3A0A075B625 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Gm43530-201ENSMUST00000195920 274 ntBASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4d-3A0A075B625 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trav4d-3A0A075B625 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Trav4d-3A0A075B625 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav4d-3A0A075B625 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav4d-3A0A075B625 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms