Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16d-dv11A0A075B617 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16d-dv11A0A075B617 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Gm11175-201ENSMUST00000116172 543 ntBASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16d-dv11A0A075B617 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav16d-dv11A0A075B617 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav16d-dv11A0A075B617 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Gm9870-201ENSMUST00000063874 645 ntBASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav16d-dv11A0A075B617 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms