Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.62■□□□□ 0.25
Ighv1-54A0A075B5W5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Gm7291-201ENSMUST00000199147 382 ntBASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-54A0A075B5W5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-54A0A075B5W5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-54A0A075B5W5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.59■□□□□ 0.25
Ighv1-54A0A075B5W5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.59■□□□□ 0.25
Ighv1-54A0A075B5W5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ighv1-54A0A075B5W5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.59■□□□□ 0.25
Ighv1-54A0A075B5W5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-54A0A075B5W5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-54A0A075B5W5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-54A0A075B5W5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv1-54A0A075B5W5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv1-54A0A075B5W5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Ighv1-54A0A075B5W5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv1-54A0A075B5W5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Ighv1-54A0A075B5W5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.58■□□□□ 0.24
Ighv1-54A0A075B5W5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-54A0A075B5W5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Gm6365-201ENSMUST00000054711 744 ntBASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-54A0A075B5W5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-54A0A075B5W5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-54A0A075B5W5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-54A0A075B5W5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-54A0A075B5W5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-54A0A075B5W5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-54A0A075B5W5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.55■□□□□ 0.24
Ighv1-54A0A075B5W5 Gm37179-201ENSMUST00000194862 823 ntBASIC16.55■□□□□ 0.24
Ighv1-54A0A075B5W5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.55■□□□□ 0.24
Ighv1-54A0A075B5W5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ighv1-54A0A075B5W5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms