Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm38300-201ENSMUST00000194245 1870 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm45182-201ENSMUST00000207579 2404 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Gm44228-201ENSMUST00000204888 2026 ntBASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Upk3aQ9JKX8 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm38099-201ENSMUST00000193280 3170 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm28791-201ENSMUST00000185888 1779 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Mir1932-201ENSMUST00000157390 90 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm22687-201ENSMUST00000158301 105 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm19705-201ENSMUST00000180495 496 ntTSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Mir8095-201ENSMUST00000185103 129 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm4545-201ENSMUST00000190797 603 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm8925-201ENSMUST00000197212 763 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm42424-201ENSMUST00000198319 376 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm8489-201ENSMUST00000209876 1152 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm7151-201ENSMUST00000211511 954 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm45925-202ENSMUST00000219904 1136 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 AC134913.1-201ENSMUST00000224563 504 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 BC085271-201ENSMUST00000191852 1487 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 AC164883.2-201ENSMUST00000227931 3815 ntBASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Upk3aQ9JKX8 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm44950-201ENSMUST00000206403 2296 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm24462-201ENSMUST00000102430 106 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm7831-201ENSMUST00000117990 552 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm11416-201ENSMUST00000119111 863 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 n-R5s47-201ENSMUST00000122516 119 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Upk3aQ9JKX8 Mir1983-201ENSMUST00000157523 132 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms