Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm20396-201ENSMUST00000173358 745 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm2975-201ENSMUST00000209710 820 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm10043-201ENSMUST00000210691 235 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 AC154642.1-201ENSMUST00000224173 740 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Lpin2-204ENSMUST00000129635 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 AC126251.1-201ENSMUST00000228170 2707 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm16073-201ENSMUST00000116032 517 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm16056-201ENSMUST00000119293 135 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm15164-201ENSMUST00000122203 271 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm22428-201ENSMUST00000158554 132 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm6726-201ENSMUST00000172786 681 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm19087-201ENSMUST00000191430 946 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm38068-201ENSMUST00000192546 540 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm2860-201ENSMUST00000199226 707 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Ighv1-83-201ENSMUST00000199643 351 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gm12661-201ENSMUST00000118780 3335 ntBASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Pcdh15Q99PJ1 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Palb2-202ENSMUST00000098068 3750 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm37069-201ENSMUST00000192742 4142 ntBASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm4886-201ENSMUST00000121874 1176 ntBASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm3760-201ENSMUST00000167475 804 ntBASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm9240-201ENSMUST00000206527 742 ntBASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm45279-201ENSMUST00000210315 391 ntBASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 AC151730.1-201ENSMUST00000226106 448 ntBASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 AC123917.1-201ENSMUST00000228063 1048 ntBASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Gm44802-201ENSMUST00000208026 1916 ntBASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Rbm25-201ENSMUST00000048155 4226 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Pcdh15Q99PJ1 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms