Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm20775-201ENSMUST00000100115 1851 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Malat1-201ENSMUST00000172812 6983 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm43670-201ENSMUST00000199047 1767 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm16409-201ENSMUST00000100510 747 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Mir467f-201ENSMUST00000116923 120 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm8688-201ENSMUST00000118240 969 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm9143-201ENSMUST00000120745 745 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm8172-201ENSMUST00000120762 750 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm13674-201ENSMUST00000121276 823 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm5834-201ENSMUST00000126680 1026 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm5973-201ENSMUST00000178542 496 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Mir6999-201ENSMUST00000183498 61 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Mir6974-201ENSMUST00000184381 83 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm7560-201ENSMUST00000187748 873 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm18797-201ENSMUST00000190809 1174 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm29462-201ENSMUST00000191458 288 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm37108-201ENSMUST00000194605 626 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm42861-201ENSMUST00000199596 634 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 AC129323.1-201ENSMUST00000216733 470 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 AC124196.1-201ENSMUST00000225970 1032 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Klf10-202ENSMUST00000226363 2917 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gm15575-201ENSMUST00000119414 1581 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 AC107757.2-201ENSMUST00000226370 1466 ntBASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Cstf3Q99LI7 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm37877-201ENSMUST00000191630 2709 ntBASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm22426-201ENSMUST00000103811 96 ntBASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm12851-201ENSMUST00000117920 421 ntBASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm12310-201ENSMUST00000118013 492 ntBASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm11901-201ENSMUST00000120412 437 ntBASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Mir1932-201ENSMUST00000157390 90 ntBASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm23094-201ENSMUST00000157551 322 ntBASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm5698-201ENSMUST00000178317 724 ntBASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm38306-201ENSMUST00000193954 237 ntBASIC7.48□□□□□ -1.21
Cstf3Q99LI7 Gm43805-201ENSMUST00000198488 824 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms