Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col16a1Q8BLX7 Gm45354-201ENSMUST00000199820 2557 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Col16a1Q8BLX7 AC155270.1-201ENSMUST00000221626 4028 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm38099-201ENSMUST00000193280 3170 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm29113-201ENSMUST00000185991 3432 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Adgrl3-209ENSMUST00000119385 4905 ntTSL 5 BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm7842-201ENSMUST00000217691 1379 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 CT025639.1-201ENSMUST00000223906 1375 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm26429-201ENSMUST00000104829 110 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm13900-201ENSMUST00000119402 498 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm12504-202ENSMUST00000148026 306 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm8046-201ENSMUST00000172151 616 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Mir6241-201ENSMUST00000184225 103 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm29008-201ENSMUST00000189387 298 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm37191-201ENSMUST00000193346 388 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm20128-201ENSMUST00000196189 417 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC10□□□□□ -0.81
Col16a1Q8BLX7 AL671874.1-201ENSMUST00000223746 1123 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm45737-201ENSMUST00000208344 1612 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm38352-201ENSMUST00000194459 2557 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Wdr48-205ENSMUST00000215307 3776 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Gm8107-201ENSMUST00000117477 2009 ntBASIC10□□□□□ -0.81
Col16a1Q8BLX7 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col16a1Q8BLX7 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 4933427D14Rik-202ENSMUST00000108506 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Abcc8-201ENSMUST00000033123 4877 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Gm3208-201ENSMUST00000168281 427 ntBASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Mir3085-201ENSMUST00000175493 89 ntBASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Gm27014-201ENSMUST00000182658 937 ntBASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Gm45900-201ENSMUST00000211879 409 ntBASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 AC132587.1-201ENSMUST00000220562 166 ntBASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 CT025639.2-201ENSMUST00000224440 1220 ntBASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Gm7265-201ENSMUST00000192735 3502 ntBASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col16a1Q8BLX7 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Plcg2-201ENSMUST00000081232 4298 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Gm8421-201ENSMUST00000119439 305 ntBASIC9.98□□□□□ -0.81
Col16a1Q8BLX7 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms