Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 AC154657.1-201ENSMUST00000226394 775 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 Olfr683-201ENSMUST00000061284 960 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Trim17-202ENSMUST00000075141 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Gm7328-201ENSMUST00000211123 2225 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Plcd4-201ENSMUST00000027362 2977 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Slc2a9-202ENSMUST00000067872 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Gm40999-201ENSMUST00000222586 3387 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 4930533K18Rik-203ENSMUST00000219192 1307 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Gm14847-201ENSMUST00000121978 519 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 Gm17137-202ENSMUST00000165729 957 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 Gm20620-201ENSMUST00000177528 168 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 Gm27210-201ENSMUST00000184263 402 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 Gm6749-201ENSMUST00000203838 405 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Gm7413-201ENSMUST00000219498 462 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 AC158238.1-201ENSMUST00000216899 1965 ntBASIC6.66□□□□□ -1.34
Rif1Q6PR54 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Cnga2-201ENSMUST00000006020 3064 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Fgr-204ENSMUST00000171223 2398 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Cpa5-203ENSMUST00000115139 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rif1Q6PR54 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Pvr-201ENSMUST00000043517 2905 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Gm37091-201ENSMUST00000195455 2087 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Gm12632-201ENSMUST00000121223 495 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Gm4556-201ENSMUST00000217808 355 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 CT009550.2-201ENSMUST00000228851 399 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.65□□□□□ -1.34
Rif1Q6PR54 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Supt7l-201ENSMUST00000065388 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Gm1559-201ENSMUST00000219596 3117 ntTSL 3 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Def8-202ENSMUST00000065534 3127 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Prss35-202ENSMUST00000179574 3211 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC6.65□□□□□ -1.34
Rif1Q6PR54 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Rif1Q6PR54 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Rif1Q6PR54 Olfr169-202ENSMUST00000215040 2316 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Rif1Q6PR54 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Rif1Q6PR54 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Rif1Q6PR54 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Rif1Q6PR54 AC114002.1-201ENSMUST00000218097 2409 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Rif1Q6PR54 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC6.65□□□□□ -1.35
Rif1Q6PR54 Gm15728-201ENSMUST00000140833 3492 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Rif1Q6PR54 Gm37522-201ENSMUST00000195437 2884 ntBASIC6.65□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms