Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm18973-201ENSMUST00000205814 511 ntBASIC8.55□□□□□ -1.04
Cntn3Q07409 Gm10688-201ENSMUST00000214985 520 ntBASIC8.55□□□□□ -1.04
Cntn3Q07409 Gm18292-201ENSMUST00000216673 919 ntBASIC8.55□□□□□ -1.04
Cntn3Q07409 AC121986.1-201ENSMUST00000218588 781 ntBASIC8.55□□□□□ -1.04
Cntn3Q07409 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC8.55□□□□□ -1.04
Cntn3Q07409 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC8.55□□□□□ -1.04
Cntn3Q07409 AC158392.1-201ENSMUST00000223720 1069 ntBASIC8.55□□□□□ -1.04
Cntn3Q07409 AC139294.2-201ENSMUST00000227159 285 ntBASIC8.55□□□□□ -1.04
Cntn3Q07409 AC114585.2-203ENSMUST00000228400 339 ntBASIC8.55□□□□□ -1.04
Cntn3Q07409 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cntn3Q07409 Gm10029-201ENSMUST00000089635 330 ntBASIC8.55□□□□□ -1.04
Cntn3Q07409 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Cntn3Q07409 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Cntn3Q07409 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Cntn3Q07409 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cntn3Q07409 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cntn3Q07409 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Cntn3Q07409 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Cntn3Q07409 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cntn3Q07409 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cntn3Q07409 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Cntn3Q07409 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Cntn3Q07409 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Zfp82-207ENSMUST00000183190 1906 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm42899-201ENSMUST00000197034 2667 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm6819-201ENSMUST00000185325 1891 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm14048-201ENSMUST00000121864 1268 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm16129-201ENSMUST00000152628 486 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC8.54□□□□□ -1.04
Cntn3Q07409 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm21454-201ENSMUST00000178599 1285 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC8.54□□□□□ -1.04
Cntn3Q07409 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Cntn3Q07409 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cntn3Q07409 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC8.54□□□□□ -1.04
Cntn3Q07409 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm8826-201ENSMUST00000193161 948 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm7546-202ENSMUST00000211354 275 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 AC123835.1-201ENSMUST00000214362 670 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Rpl32l-201ENSMUST00000216127 399 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 AC211878.6-201ENSMUST00000221896 358 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 AC163631.1-201ENSMUST00000225041 598 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm22971-201ENSMUST00000083305 97 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Ptchd1-201ENSMUST00000038665 2768 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
Cntn3Q07409 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm37022-201ENSMUST00000192517 2254 ntBASIC8.54□□□□□ -1.04
Cntn3Q07409 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms